BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB016H03SP1|AL427079
(889 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1001 430 e-120
>3x_Contig1001
Length = 4198
Score = 430 bits (213), Expect = e-120
Identities = 215/217 (99%)
Strand = Plus / Plus
Query: 673 gttctcgtcggtgaagagatcaamtgtgctatgatgttgtatttggatatcatcaaccta 732
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 1 gttctcgtcggtgaagagatcaaatgtgctatgatgttgtatttggatatcatcaaccta 60
Query: 733 tttttatacattctacggatcatgtcaagaaatcaagacgattaacaccttttgcatact 792
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tttttatacattctacggatcatgtcaagaaatcaagacgattaacaccttttgcatact 120
Query: 793 tacaaaacatgtaaatacatcttatgtccaagtaaaaatatgttctgaactaccctttat 852
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tacaaaacatgtaaatacatcttatgtccaagtaaaaatatgttctgaactaccctttat 180
Query: 853 gtctcaagagtcgatacccagattcaatattacmagc 889
||||||||||||||||||||||||||||||||| |||
Sbjct: 181 gtctcaagagtcgatacccagattcaatattacaagc 217
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.40 0.714 1.33
Gapped
Lambda K H
1.40 0.714 1.33
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5018
Number of Sequences: 1807
Number of extensions: 5018
Number of successful extensions: 114
Number of sequences better than 1.0e-20: 1
length of query: 889
length of database: 10,358,551
effective HSP length: 16
effective length of query: 873
effective length of database: 10,329,639
effective search space: 9017774847
effective search space used: 9017774847
T: 0
A: 40
X1: 5 (10.1 bits)
X2: 14 (28.2 bits)
S1: 12 (24.7 bits)
S2: 50 (101.3 bits)